Low-level APIΒΆ
The MDTraj trajectory file objects provide a low-level interface to each of the
supported trajectory formats. The high level interface is provided by the
mdtraj.load() function.
AmberNetCDFRestartFile(filename[, mode, ...]) |
Interface for reading and writing AMBER NetCDF files. |
AmberRestartFile(filename[, mode, ...]) |
Interface for reading and writing AMBER ASCII restart files. |
ArcTrajectoryFile(filename[, mode, ...]) |
Interface for reading and writing to an TINKER archive files. |
BINPOSTrajectoryFile(filename[, mode, ...]) |
Interface for reading and writing to an AMBER BINPOS file. |
DCDTrajectoryFile(filename[, mode, ...]) |
Interface for reading and writing to a CHARMM/NAMD DCD file. |
DTRTrajectoryFile(filename[, mode, ...]) |
Interface for reading and writing to a DESMOND dtr file. |
GroTrajectoryFile(filename[, mode, ...]) |
Interface for reading and writing to GROMACS GRO files. |
HDF5TrajectoryFile(filename[, mode, ...]) |
Interface for reading and writing to a MDTraj HDF5 molecular dynamics trajectory file, whose format is described here. |
LAMMPSTrajectoryFile(filename[, mode, ...]) |
Interface for reading and writing to a LAMMPS lammpstrj files. |
LH5TrajectoryFile(filename[, mode, ...]) |
Interface for reading and writing to a MSMBuilder2 “LH5” molecular dynamics trajectory file, a deprecated format. |
MDCRDTrajectoryFile(filename[, n_atoms, ...]) |
Interface for reading and writing to an AMBER mdcrd files. |
NetCDFTrajectoryFile(filename[, mode, ...]) |
Interface for reading and writing to AMBER NetCDF files. |
PDBTrajectoryFile(filename[, mode, ...]) |
Interface for reading and writing Protein Data Bank (PDB) files |
TRRTrajectoryFile(filename[, mode, ...]) |
Interface for reading and writing to a GROMACS TRR file. |
XTCTrajectoryFile(filenamee[, mode, ...]) |
Interface for reading and writing to a GROMACS XTC file. |
XYZTrajectoryFile(filename[, mode, ...]) |
Interface for reading and writing to xyz files. |